Number of Reads | 782,966,013 |
Valid Barcodes | 97.4% |
Sequencing Saturation | 60.4% |
Q30 Bases in Barcode | 96.0% |
Q30 Bases in RNA Read | 94.3% |
Q30 Bases in UMI | 95.8% |
Reads Mapped to Genome | 97.5% |
Reads Mapped Confidently to Genome | 93.8% |
Reads Mapped Confidently to Intergenic Regions | 4.9% |
Reads Mapped Confidently to Intronic Regions | 27.7% |
Reads Mapped Confidently to Exonic Regions | 61.2% |
Reads Mapped Confidently to Transcriptome | 57.4% |
Reads Mapped Antisense to Gene | 1.5% |
Estimated Number of Cells | 7,438 |
Fraction Reads in Cells | 94.8% |
Mean Reads per Cell | 105,265 |
Median Genes per Cell | 4,097 |
Total Genes Detected | 23,409 |
Median UMI Counts per Cell | 20,435 |
Name | TWEJ-ND050119-ND050119_sytox_neg_CD34_pos-lib1 |
Description | |
Transcriptome | GRCh38 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.1 |
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